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DESCRIPTION:We are pleased to inform you that on January 26th\, 13:15–15:
 00\, at the University of Stavanger\, we will host a workshop on “Advanc
 ed Signal/Image Processing”\, featuring: larger than memory image proces
 sing and bio sensing. The tentative program is as follows:\n\n13:15–13:3
 0 – Gathering and welcome\n13:30–14:00 – Larger-than-Memory Image Pr
 ocessing\, Prof. Jon Sporring\n(Department of Computer Science\, Universit
 y of Copenhagen\, Denmark)\n14:00–14:15 – Coffee break\n14:15–14:45 
 – Non-Contact and Contact SpO₂ Measurement Methods for Newborn Resusci
 tation\,\nAssociate Prof. Øyvind Meinich-Bache\n(Laerdal Medical and Depa
 rtment of Electrical Engineering and Computer Science\, University of Stav
 anger)\n\nPlace: University of Stavanger\, Kjølv Egelands Hus\, room: Dat
 averkstedet\n\nThe event will be held in a hybrid format\, and you can joi
 n online using Teams:\nMicrosoft Teams meeting\nJoin: https://teams.micros
 oft.com/meet/31631175440466?p=1GFeKqdcBaQSM22j5T\nMeeting ID: 316 311 754 
 404 66\nPasscode: Gv2fh6Jt\n\nMore info on the talks and speakers:\n\nFirs
 t Talk: Larger than memory image processing\n\nAuthors: Jon Sporring\, Uni
 versity of Copenhagen\, and David Stansby\, University College London\n\nA
 bstract: This report addresses larger-than-memory image analysis for petas
 cale datasets such as 1.4 PB electron-microscopy volumes and 150 TB human-
 organ atlases. We argue that performance is fundamentally I/O-bound rather
  than compute-bound. We show that structuring analysis as streaming passes
  over data is crucial: for 3D volumes\, representing data as 2D slice stac
 ks (e.g.\, directories or multipage TIFF) outperforms 3D chunked layouts (
 e.g.\, Zarr/HDF5) because most algorithms can be organized to read each vo
 xel once or only a few times\, avoiding repeated neighbor reads and halo a
 mplification. We formalize this with sweep-based execution (natural 2D/3D 
 orders)\, windowed operations\, and overlap-aware tiling to minimize redun
 dant access. Building on these principles\, we introduce a domain-specific
  language (DSL) that encodes algorithms with intrinsic knowledge of their 
 optimal streaming and memory use\; the DSL performs compile-time and run-t
 ime pipeline analyses to automatically select window sizes\, fuse stages\,
  tee and zip streams\, and schedule passes for limited-RAM machines\, yiel
 ding near-linear I/O scans and predictable memory footprints. The approach
  integrates with existing tooling for segmentation and morphology but refr
 ames pre/post-processing as pipelines that privilege sequential read/write
  patterns\, delivering substantial throughput gains for extremely large im
 ages without requiring full-volume residency in memory.\n\nBio: Jon Sporri
 ng received his Master and Ph.D. degree from the Department of Computer Sc
 ience (DIKU)\, University of Copenhagen\, Denmark in 1995 and 1998\, respe
 ctively. Part of his Ph.D. program was carried out at IBM Research Center\
 , Almaden\, California\, USA. Following his Ph.D\, he worked as a visiting
  researcher at the Computer Vision and Robotics Lab at Foundation for Rese
 arch &amp; Technology - Hellas\, Greece\, and as an assistant research profess
 or at 3D-Lab\, School of Dentistry\, University of Copenhagen. During 2003
 -2018 he was an associate professor at DIKU. From 2008-2009 he was a part-
 time Senior Researcher at Nordic Bioscience a/s. In the period 2012-13\, h
 e is a visiting professor at the School of Computer Science\, McGill Unive
 rsity\, Montreal\, Canada. Jon Sporring also co-founded DigiCorpus Aps in 
 2012 and served as Chief research officer of the company from 2012-16 deve
 loping computer vision-based systems for automatic feedback for physiother
 apeutic rehabilitation. In 2007-2012\, 2015-2019\, and 2021 he was Deputy 
 head for Research at DIKU. Since 2018\, he is a full professor at DIKU\, a
 nd since 2019 he is the Deputy head of the Center for Quantifying Images f
 or MAXIV (QIM).\n\nSecond Talk: Non-Contact and Contact SpO₂ Measurement
  Methods for Newborn Resuscitation\n\nAbstract: Laerdal Medical is develop
 ing a sensor/product to assess SpO₂ during the critical first minutes af
 ter birth. Currently\, the standard of care—measurement on the newborn w
 rist—fails to provide healthcare providers with reliable SpO₂ readings
  during resuscitation. This limitation may be attributed to poor periphera
 l perfusion in the wrists of non-breathing infants\, necessitating explora
 tion of alternative measurement sites. The measurement principle relies on
  differential light transmission and absorption by tissue across various w
 avelengths\, which varies with oxygen saturation levels. Both non-contact 
 approaches (using multispectral camera technology) and contact-based metho
 ds (utilizing smartwatch-style sensors) are being investigated to identify
  optimal solutions for this clinical challenge.\n\nBio: Øyvind Meinich-Ba
 che received his PhD in image processing and deep learning (2020). Senior 
 Data Scientist at Laerdal Medical and Associate Professor II at University
  of Stavanger (2020-current). Specializes in automatic activity recognitio
 n from signals\, particularly images and video\, with focus on emergency r
 esponse applications.\n\nRoom: DataVerkstedet\, Bldg: Kjølv Egelands Hus\
 , University of Stavanger\, Stavanger\, Rogaland\, Norway
LOCATION:Room: DataVerkstedet\, Bldg: Kjølv Egelands Hus\, University of S
 tavanger\, Stavanger\, Rogaland\, Norway
ORGANIZER:mahdieh.khanmohammadi@uis.no
SEQUENCE:63
SUMMARY:Nordic IEEE SPS workshop on Advanced Signal/Image Processing: Large
 r Than Memory Images to Biomedical Sensing
URL;VALUE=URI:https://events.vtools.ieee.org/m/521853
X-ALT-DESC:Description: &lt;br /&gt;&lt;p data-start=&quot;153&quot; data-end=&quot;334&quot;&gt;We are ple
 ased to inform you that on &lt;strong data-start=&quot;190&quot; data-end=&quot;219&quot;&gt;January
  26th\,&amp;nbsp\;&lt;strong&gt;13:15&amp;ndash\;15:00&lt;/strong&gt;&lt;/strong&gt;\, at the &lt;stron
 g data-start=&quot;228&quot; data-end=&quot;255&quot;&gt;University of Stavanger&lt;/strong&gt;\, we wi
 ll host a workshop on &lt;strong data-start=&quot;284&quot; data-end=&quot;322&quot;&gt;&amp;ldquo\;Adva
 nced Signal/Image Processing&amp;rdquo\;&lt;/strong&gt;\, featuring: larger than mem
 ory image processing and bio sensing. The tentative program is as follows:
 &amp;nbsp\;&lt;/p&gt;\n&lt;p data-start=&quot;336&quot; data-end=&quot;800&quot;&gt;&lt;strong data-start=&quot;336&quot; d
 ata-end=&quot;351&quot;&gt;13:15&amp;ndash\;13:30&lt;/strong&gt;&amp;nbsp\;&amp;ndash\; Gathering and wel
 come&lt;br data-start=&quot;375&quot; data-end=&quot;378&quot;&gt;&lt;strong data-start=&quot;378&quot; data-end=
 &quot;393&quot;&gt;13:30&amp;ndash\;14:00&lt;/strong&gt;&amp;nbsp\;&amp;ndash\; &lt;em data-start=&quot;396&quot; data
 -end=&quot;433&quot;&gt;Larger-than-Memory Image Processing&lt;/em&gt;\, Prof. Jon Sporring&lt;b
 r data-start=&quot;453&quot; data-end=&quot;456&quot;&gt;(Department of Computer Science\, Univer
 sity of Copenhagen\, Denmark)&lt;br data-start=&quot;523&quot; data-end=&quot;526&quot;&gt;&lt;strong d
 ata-start=&quot;526&quot; data-end=&quot;541&quot;&gt;14:00&lt;strong data-start=&quot;559&quot; data-end=&quot;574
 &quot;&gt;&amp;ndash\;14:15 &lt;/strong&gt;&lt;/strong&gt;&amp;ndash\; Coffee break&lt;br data-start=&quot;556
 &quot; data-end=&quot;559&quot;&gt;&lt;strong data-start=&quot;559&quot; data-end=&quot;574&quot;&gt;14:15&amp;ndash\;14:4
 5&lt;/strong&gt; &amp;ndash\; &lt;em data-start=&quot;577&quot; data-end=&quot;653&quot;&gt;Non-Contact and Co
 ntact SpO₂ Measurement Methods for Newborn Resuscitation&lt;/em&gt;\,&lt;br data-
 start=&quot;654&quot; data-end=&quot;657&quot;&gt;Associate Prof. &amp;Oslash\;yvind Meinich-Bache&lt;br
  data-start=&quot;693&quot; data-end=&quot;696&quot;&gt;(Laerdal Medical and Department of Electr
 ical Engineering and Computer Science\, University of Stavanger)&lt;/p&gt;\n&lt;p d
 ata-start=&quot;802&quot; data-end=&quot;878&quot;&gt;&lt;strong data-start=&quot;802&quot; data-end=&quot;812&quot;&gt;Pla
 ce:&lt;/strong&gt; University of Stavanger\, Kj&amp;oslash\;lv Egelands Hus\, room: 
 &lt;strong&gt;Dataverkstedet&lt;/strong&gt;&lt;/p&gt;\n&lt;p data-start=&quot;880&quot; data-end=&quot;1013&quot;&gt;T
 he event will be held in a &lt;strong data-start=&quot;908&quot; data-end=&quot;925&quot;&gt;hybrid 
 format&lt;/strong&gt;\, and you can join online using Teams:&amp;nbsp\;&lt;/p&gt;\n&lt;div&gt;&lt;s
 pan class=&quot;me-email-text&quot;&gt;Microsoft Teams meeting&lt;/span&gt;&lt;/div&gt;\n&lt;div&gt;&lt;span
  class=&quot;me-email-text&quot;&gt;Join: &lt;/span&gt;&lt;a id=&quot;meet_invite_block.action.join_l
 ink&quot; class=&quot;me-email-link&quot; title=&quot;https://teams.microsoft.com/meet/3163117
 5440466?p=1GFeKqdcBaQSM22j5T&quot; href=&quot;https://teams.microsoft.com/meet/31631
 175440466?p=1GFeKqdcBaQSM22j5T&quot; data-auth=&quot;NotApplicable&quot; aria-label=&quot;Meet
 ing join&quot; data-outlook-id=&quot;b6ed74a0-44c8-4fe4-ba6d-eb77f876fc03&quot;&gt;https://t
 eams.microsoft.com/meet/31631175440466?p=1GFeKqdcBaQSM22j5T&lt;/a&gt;&lt;/div&gt;\n&lt;di
 v&gt;&lt;span class=&quot;me-email-text-secondary&quot;&gt;Meeting ID: &lt;/span&gt;&lt;span class=&quot;me
 -email-text&quot;&gt;316 311 754 404 66&lt;/span&gt;&lt;/div&gt;\n&lt;div&gt;&lt;span class=&quot;me-email-t
 ext-secondary&quot;&gt;Passcode: &lt;/span&gt;&lt;span class=&quot;me-email-text&quot;&gt;Gv2fh6Jt&lt;/span
 &gt;&lt;/div&gt;\n&lt;div&gt;&amp;nbsp\;&lt;/div&gt;\n&lt;p&gt;More info on the talks and speakers:&lt;/p&gt;\n
 &lt;p class=&quot;MsoNormal&quot;&gt;&lt;strong&gt;First Talk:&lt;/strong&gt; Larger than memory image
  processing&lt;/p&gt;\n&lt;p class=&quot;MsoNormal&quot;&gt;Authors: &lt;span class=&quot;outlook-search
 -highlight&quot; data-markjs=&quot;true&quot;&gt;Jon&lt;/span&gt; &lt;span class=&quot;outlook-search-high
 light&quot; data-markjs=&quot;true&quot;&gt;Sporring&lt;/span&gt;\, University of Copenhagen\, and
  &amp;nbsp\;David Stansby\, University College London&lt;/p&gt;\n&lt;p class=&quot;MsoNormal
 &quot;&gt;&lt;strong&gt;Abstract:&lt;/strong&gt; This report addresses larger-than-memory imag
 e analysis for petascale datasets such as 1.4 PB electron-microscopy volum
 es and 150 TB human-organ atlases. We argue that performance is fundamenta
 lly I/O-bound rather than compute-bound. We show that structuring analysis
  as streaming passes over data is crucial: for 3D volumes\, representing d
 ata as 2D slice stacks (e.g.\, directories or multipage TIFF) outperforms 
 3D chunked layouts (e.g.\, Zarr/HDF5) because most algorithms can be organ
 ized to read each voxel once or only a few times\, avoiding repeated neigh
 bor reads and halo amplification.&amp;nbsp\; We formalize this with sweep-base
 d execution (natural 2D/3D orders)\, windowed operations\, and overlap-awa
 re tiling to minimize redundant access.&amp;nbsp\; Building on these principle
 s\, we introduce a domain-specific language (DSL) that encodes algorithms 
 with intrinsic knowledge of their optimal streaming and memory use\; the D
 SL performs compile-time and run-time pipeline analyses to automatically s
 elect window sizes\, fuse stages\, tee and zip streams\, and schedule pass
 es for limited-RAM machines\, yielding near-linear I/O scans and predictab
 le memory footprints.&amp;nbsp\; The approach integrates with existing tooling
  for segmentation and morphology but reframes pre/post-processing as pipel
 ines that privilege sequential read/write patterns\, delivering substantia
 l throughput gains for extremely large images without requiring full-volum
 e residency in memory.&lt;/p&gt;\n&lt;p&gt;&lt;span class=&quot;outlook-search-highlight&quot; data
 -markjs=&quot;true&quot;&gt;&lt;strong&gt;Bio:&lt;/strong&gt; Jon&lt;/span&gt; &lt;span class=&quot;outlook-searc
 h-highlight&quot; data-markjs=&quot;true&quot;&gt;Sporring&lt;/span&gt; received his Master and Ph
 .D. degree from the Department of Computer Science (DIKU)\, University of 
 Copenhagen\, Denmark in 1995 and 1998\, respectively. Part of his Ph.D. pr
 ogram was carried out at IBM Research Center\, Almaden\, California\, USA.
  Following his Ph.D\, he worked as a visiting researcher at the Computer V
 ision and Robotics Lab at Foundation for Research &amp;amp\; Technology - Hell
 as\, Greece\, and as an assistant research professor at 3D-Lab\, School of
  Dentistry\, University of Copenhagen. During 2003-2018 he was an associat
 e professor at DIKU. From 2008-2009 he was a part-time Senior Researcher a
 t Nordic Bioscience a/s. In the period 2012-13\, he is a visiting professo
 r at the School of Computer Science\, McGill University\, Montreal\, Canad
 a. &lt;span class=&quot;outlook-search-highlight&quot; data-markjs=&quot;true&quot;&gt;Jon&lt;/span&gt; &lt;s
 pan class=&quot;outlook-search-highlight&quot; data-markjs=&quot;true&quot;&gt;Sporring&lt;/span&gt; al
 so co-founded DigiCorpus Aps in 2012 and served as Chief research officer 
 of the company from 2012-16 developing computer vision-based systems for a
 utomatic feedback for physiotherapeutic rehabilitation. In 2007-2012\, 201
 5-2019\, and 2021 he was Deputy head for Research at DIKU. Since 2018\, he
  is a full professor at DIKU\, and since 2019 he is the Deputy head of the
  Center for Quantifying Images for MAXIV (QIM).&lt;/p&gt;\n&lt;p&gt;&amp;nbsp\;&lt;/p&gt;\n&lt;div&gt;
 &lt;strong&gt;Second Talk: &lt;/strong&gt;Non-Contact and Contact SpO₂ Measurement M
 ethods for Newborn Resuscitation&lt;/div&gt;\n&lt;div&gt;&amp;nbsp\;&lt;/div&gt;\n&lt;div&gt;&lt;strong&gt;A
 bstract:&lt;/strong&gt;&amp;nbsp\;Laerdal Medical is developing a sensor/product to 
 assess SpO₂ during the critical first minutes after birth. Currently\, t
 he standard of care&amp;mdash\;measurement on the newborn wrist&amp;mdash\;fails t
 o provide healthcare providers with reliable SpO₂ readings during resusc
 itation. This limitation may be attributed to poor peripheral perfusion in
  the wrists of non-breathing infants\, necessitating exploration of altern
 ative measurement sites. The measurement principle relies on differential 
 light transmission and absorption by tissue across various wavelengths\, w
 hich varies with oxygen saturation levels. Both non-contact approaches (us
 ing multispectral camera technology) and contact-based methods (utilizing 
 smartwatch-style sensors) are being investigated to identify optimal solut
 ions for this clinical challenge.&lt;/div&gt;\n&lt;div&gt;&amp;nbsp\;&lt;/div&gt;\n&lt;div&gt;&lt;strong&gt;
 Bio:&lt;/strong&gt; &amp;Oslash\;yvind Meinich-Bache received his PhD in image proce
 ssing and deep learning (2020). Senior Data Scientist at Laerdal Medical a
 nd Associate Professor II at University of Stavanger (2020-current). Speci
 alizes in automatic activity recognition from signals\, particularly image
 s and video\, with focus on emergency response applications.&lt;/div&gt;\n&lt;div&gt;&amp;
 nbsp\;&lt;/div&gt;
END:VEVENT
END:VCALENDAR

